Biological Nitrogen Removal Database

A manually curated data resource for microbial nitrogen removal


Detailed information

Microorganism

Salmonella enterica subsp. enterica serovar Typhimurium str. LT2

Taxonomy

  • Phylum : Proteobacteria
  • Class : Gammaproteobacteria
  • Order : Enterobacterales
  • Family : Enterobacteriaceae
  • Genus : Salmonella

Isolation Source

nan

Enzyme Name

Chaperone NapD

  • Encoding Gene:napD
  • DNA Size:4857450 bp
  • Nucleotide FASTA sequence: Link

  • UniProt I.D: Q7CQ60

Protein Information

  • Pro_GenBank I.D: AAL21162.1

  • Length:87 aa
  • Protein FASTA_sequence: Link

Information about Article

  • Reference:McClelland et al., 2001
  • Title:Complete genome sequence of Salmonella enterica serovar Typhimurium LT2
  • Pubmed ID:11677609.0
  • Pubmed link: Link

  • Full research link: Link

  • Abstract:Salmonella enterica subspecies I, serovar Typhimurium (S. typhimurium), is a leading cause of human gastroenteritis, and is used as a mouse model of human typhoid fever. The incidence of non-typhoid salmonellosis is increasing worldwide, causing millions of infections and many deaths in the human population each year. Here we sequenced the 4,857-kilobase (kb) chromosome and 94-kb virulence plasmid of S. typhimurium strain LT2. The distribution of close homologues of S. typhimurium LT2 genes in eight related enterobacteria was determined using previously completed genomes of three related bacteria, sample sequencing of both S. enterica serovar Paratyphi A (S. paratyphi A) and Klebsiella pneumoniae, and hybridization of three unsequenced genomes to a microarray of S. typhimurium LT2 genes. Lateral transfer of genes is frequent, with 11% of the S. typhimurium LT2 genes missing from S. enterica serovar Typhi (S. typhi), and 29% missing from Escherichia coli K12. The 352 gene homologues of S. typhimurium LT2 confined to subspecies I of S. enterica-containing most mammalian and bird pathogens-are useful for studies of epidemiology, host specificity and pathogenesis. Most of these homologues were previously unknown, and 50 may be exported to the periplasm or outer membrane, rendering them accessible as therapeutic or vaccine targets.