Biological Nitrogen Removal Database

A manually curated data resource for microbial nitrogen removal


Detailed information

Microorganism

Escherichia coli str. K-12 substr. MG1655

Taxonomy

  • Phylum : Proteobacteria
  • Class : Gammaproteobacteria
  • Order : Enterobacterales
  • Family : Enterobacteriaceae
  • Genus : Escherichia

Isolation Source

nan

Enzyme Name

NapA signal peptide-binding chaperone NapD

  • Encoding Gene:napD
  • DNA Size:4641652 bp
  • Nucleotide FASTA sequence: Link

  • UniProt I.D: P0A9I5

Protein Information

  • Pro_GenBank I.D: AAC75267.1

  • Length:87 aa
  • Protein FASTA_sequence: Link

Information about Article

  • Reference:Blattner et al., 1997
  • Title:The complete genome sequence of Escherichia coli K-12
  • Pubmed ID:9278503.0
  • Pubmed link: Link

  • Full research link: Link

  • Abstract:The 4,639,221-base pair sequence of Escherichia coli K-12 is presented. Of 4288 protein-coding genes annotated, 38 percent have no attributed function. Comparison with five other sequenced microbes reveals ubiquitous as well as narrowly distributed gene families; many families of similar genes within E. coli are also evident. The largest family of paralogous proteins contains 80 ABC transporters. The genome as a whole is strikingly organized with respect to the local direction of replication; guanines, oligonucleotides possibly related to replication and recombination, and most genes are so oriented. The genome also contains insertion sequence (IS) elements, phage remnants, and many other patches of unusual composition indicating genome plasticity through horizontal transfer.